Gene regulation and morphogenesis

Cis-regulatory landscape dynamics in development and disease

Dr Martin Franke
Researcher associated to Dr Juan J. Tena

Summary
Five relevant publications
Lab members & collaborators

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Five relevant publications

  • Franke M, Daly AF, Palmeira L, Tirosh A, Stigliano A, Trifan E, Faucz FR, Abboud D, Petrossians P, Tena JJ, et al.: Duplications disrupt chromatin architecture and rewire GPR101-enhancer communication in X-linked acrogigantism. The American Journal of Human Genetics (02/2022), 109:553–570.
     
  • Franke M, de la Calle-Mustienes, E., Neto, A., Almuedo-Castillo, M., Irastorza-Azcarate, I., Acemel, R. D., Tena, J. J., Santos-Pereira, J. M., & Gómez-Skarmeta, J. L. (2021). CTCF knockout in zebrafish induces alterations in regulatory landscapes and developmental gene expression. Nature Communications (09/2021) 12:1, 12(1), 1–19. https://doi.org/10.1038/s41467-021-25604-5
     
  • Alexandra Despang, Robert Schöpflin, Martin Franke, Salaheddine Ali, Ivana Jerković, Christina Paliou, Wing-Lee Chan, Bernd Timmermann, Lars Wittler, Martin Vingron, Stefan Mundlos, Daniel M. Ibrahim: Functional dissection of the Sox9–Kcnj2 locus identifies nonessential and instructive roles of TAD architecture. Nature Genetics (08/2019); 51(8)., DOI:10.1038/s41588-019-0466-z
     
  • Martin Franke, José Luis Gómez-Skarmeta: An evolutionary perspective of regulatory landscape dynamics in development and disease. Current Opinion in Cell Biology (07/2018); 55., DOI:10.1016/j.ceb.2018.06.009
     
  • Franke M, Ibrahim DM, Andrey G, Schwarzer W, Heinrich V, Schöpflin R, Kraft K, Kempfer R, Jerković I, Chan WL, Spielmann M, Bernd Timmermann, Wittler L, Kurth I, Cambiaso P, Zuffardi O, Houge G, Lambie L, Brancati F, Pombo A, Vingron M, Spitz F, Stefan Mundlos: Formation of new chromatin domains determines pathogenicity of genomic duplications. Nature (10/2016); 538 (7624). DOI: 10.1038/nature19800
 

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