Research Groups
Gene regulation and morphogenesis
Five relevant publications
1. Bogdanovic O, Smits AH, de la Calle Mustienes E, Tena JJ, Ford E, Williams R, Senanayake U, Schultz MD, Hontelez S, van Kruijsbergen I, Rayon T, Gnerlich F, Carell T, Veenstra JGC, Manzanares M, Sauka-Spengler T, Ecker JR, Vermeulen, Gómez-Skarmeta JL, Lister R. Active DNA demethylation during the vertebrate phylotypic period. Nature Genet. 48,417-26 (2016).
2. Acemel RD, Tena JJ, Irastorza I, Marlétaz F, Gómez-Marín C, de la Calle-Mustienes E, Bertrand S, Diaz S, Aldea D, Aury J-M, Mangenot S, Holland PWH, Devos DP, Maeso I, Escrivá H, Gómez-Skarmeta JL. A single 3D chromatin compartment in amphioxus reveals stepwise evolution of vertebrate Hox bimodal regulation. Nature Genet. 48,336-41 (2016).
3. Gómez-Marín C, Tena JJ, Acemel RD, López-Mayorga M, Naranjo S, de la Calle-Mustienes E, Maeso I, Beccari L, Aneas I, Vielmas E, Bovolenta P, Nobrega MA, Carvajal J, Gómez-Skarmeta JL. Evolutionary comparison reveals that diverging CTCF sites are signatures of ancestral topological associating domains borders. Proc. Natl. Acad. Sci. USA 112, 7542-7548 (2015).
4. Cebola I, Rodríguez-Seguí SA, Cho CH, Bessa J, Rovira M, Luengo M, Chhatriwala M, Berry A, Ponsa-Cobas J, Maestro MA, Jennings RE, Pasquali L, Morán I, Castro N, Hanley NA, Gomez-Skarmeta JL, Vallier L, Ferrer J. TEAD and YAP regulate the enhancer network of human embryonic pancreatic progenitors. Nat. Cell Biol. 7, 615-626 (2015).
5. Smemo S, Tena JJ, Kim KH, Gamazon ER, Sakabe NJ, Gómez-Marín C, Aneas I, Credidio FL, Sobreira DR, Wasserman NF, Lee JH, Puviindran V, Tam D, Shen M, Son JE, Vakili NA, Sung HK, Naranjo S, Acemel RD, Manzanares M, Nagy A, Cox NJ, Hui CC, Gómez-Skarmeta JL, Nóbrega MA. Obesity-associated variants within FTO form long-range functional connections with IRX3. Nature 507, 371-5 (2014).